Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.8■■■□□ 2.84
Slc1a4O35874 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Slc1a4O35874 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.79■■■□□ 2.84
Slc1a4O35874 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Slc1a4O35874 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Slc1a4O35874 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.76■■■□□ 2.84
Slc1a4O35874 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
Slc1a4O35874 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Slc1a4O35874 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Slc1a4O35874 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.65■■■□□ 2.82
Slc1a4O35874 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.6■■■□□ 2.81
Slc1a4O35874 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Slc1a4O35874 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Slc1a4O35874 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Slc1a4O35874 Gm26115-201ENSMUST00000175605 87 ntBASIC32.55■■■□□ 2.8
Slc1a4O35874 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
Slc1a4O35874 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Slc1a4O35874 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Slc1a4O35874 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Slc1a4O35874 Gm8109-201ENSMUST00000194076 746 ntBASIC32.41■■■□□ 2.78
Slc1a4O35874 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Slc1a4O35874 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.38■■■□□ 2.77
Slc1a4O35874 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Slc1a4O35874 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Slc1a4O35874 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Slc1a4O35874 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.29■■■□□ 2.76
Slc1a4O35874 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.26■■■□□ 2.75
Slc1a4O35874 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Slc1a4O35874 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.22■■■□□ 2.75
Slc1a4O35874 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Slc1a4O35874 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Slc1a4O35874 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Slc1a4O35874 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Slc1a4O35874 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
Slc1a4O35874 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Slc1a4O35874 Gm27322-201ENSMUST00000184007 104 ntBASIC32.09■■■□□ 2.73
Slc1a4O35874 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Slc1a4O35874 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Slc1a4O35874 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Slc1a4O35874 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Slc1a4O35874 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
Slc1a4O35874 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32■■■□□ 2.71
Slc1a4O35874 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Slc1a4O35874 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Slc1a4O35874 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Slc1a4O35874 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.94■■■□□ 2.7
Slc1a4O35874 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Slc1a4O35874 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.89■■■□□ 2.7
Slc1a4O35874 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Slc1a4O35874 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.86■■■□□ 2.69
Slc1a4O35874 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Slc1a4O35874 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.85■■■□□ 2.69
Slc1a4O35874 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slc1a4O35874 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Slc1a4O35874 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Slc1a4O35874 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Slc1a4O35874 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Slc1a4O35874 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Slc1a4O35874 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.63■■■□□ 2.65
Slc1a4O35874 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.62■■■□□ 2.65
Slc1a4O35874 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Slc1a4O35874 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slc1a4O35874 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Slc1a4O35874 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Slc1a4O35874 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Slc1a4O35874 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Slc1a4O35874 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Slc1a4O35874 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slc1a4O35874 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slc1a4O35874 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.47■■■□□ 2.63
Slc1a4O35874 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Slc1a4O35874 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slc1a4O35874 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slc1a4O35874 Gm24804-201ENSMUST00000174982 85 ntBASIC31.42■■■□□ 2.62
Slc1a4O35874 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Slc1a4O35874 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Slc1a4O35874 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Slc1a4O35874 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
Slc1a4O35874 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Slc1a4O35874 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Slc1a4O35874 Mipep-204ENSMUST00000225043 1548 ntBASIC31.3■■■□□ 2.6
Slc1a4O35874 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.29■■■□□ 2.6
Slc1a4O35874 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Slc1a4O35874 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Slc1a4O35874 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Slc1a4O35874 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Slc1a4O35874 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Slc1a4O35874 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slc1a4O35874 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slc1a4O35874 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Slc1a4O35874 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slc1a4O35874 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slc1a4O35874 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Slc1a4O35874 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slc1a4O35874 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slc1a4O35874 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Slc1a4O35874 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Slc1a4O35874 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Slc1a4O35874 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Slc1a4O35874 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms