Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Polr2jO08740 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Polr2jO08740 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Polr2jO08740 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2jO08740 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.24■■□□□ 1.79
Polr2jO08740 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Polr2jO08740 Gm25238-201ENSMUST00000174914 89 ntBASIC26.17■■□□□ 1.78
Polr2jO08740 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2jO08740 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2jO08740 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Polr2jO08740 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Polr2jO08740 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Polr2jO08740 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.1■■□□□ 1.77
Polr2jO08740 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.09■■□□□ 1.77
Polr2jO08740 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.07■■□□□ 1.76
Polr2jO08740 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Polr2jO08740 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.05■■□□□ 1.76
Polr2jO08740 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Polr2jO08740 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Polr2jO08740 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Polr2jO08740 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Polr2jO08740 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Polr2jO08740 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Polr2jO08740 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Polr2jO08740 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Polr2jO08740 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Polr2jO08740 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Polr2jO08740 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Polr2jO08740 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Polr2jO08740 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Polr2jO08740 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.82■■□□□ 1.72
Polr2jO08740 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.77■■□□□ 1.72
Polr2jO08740 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Polr2jO08740 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
Polr2jO08740 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.69■■□□□ 1.7
Polr2jO08740 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Polr2jO08740 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.68■■□□□ 1.7
Polr2jO08740 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Polr2jO08740 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2jO08740 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Polr2jO08740 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.61■■□□□ 1.69
Polr2jO08740 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Polr2jO08740 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Polr2jO08740 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Polr2jO08740 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Polr2jO08740 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Polr2jO08740 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Polr2jO08740 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2jO08740 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Polr2jO08740 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.52■■□□□ 1.68
Polr2jO08740 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.49■■□□□ 1.67
Polr2jO08740 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.48■■□□□ 1.67
Polr2jO08740 Rab21-202ENSMUST00000218831 843 ntBASIC25.48■■□□□ 1.67
Polr2jO08740 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Polr2jO08740 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Polr2jO08740 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Polr2jO08740 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Polr2jO08740 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Polr2jO08740 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.43■■□□□ 1.66
Polr2jO08740 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.42■■□□□ 1.66
Polr2jO08740 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Polr2jO08740 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Polr2jO08740 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.38■■□□□ 1.65
Polr2jO08740 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.37■■□□□ 1.65
Polr2jO08740 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Polr2jO08740 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Polr2jO08740 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Polr2jO08740 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Polr2jO08740 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Polr2jO08740 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Polr2jO08740 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Polr2jO08740 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Polr2jO08740 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.29■■□□□ 1.64
Polr2jO08740 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.29■■□□□ 1.64
Polr2jO08740 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Polr2jO08740 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Polr2jO08740 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Polr2jO08740 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Polr2jO08740 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Polr2jO08740 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Polr2jO08740 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Polr2jO08740 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Polr2jO08740 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Polr2jO08740 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Polr2jO08740 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Polr2jO08740 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.16■■□□□ 1.62
Polr2jO08740 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Polr2jO08740 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Polr2jO08740 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Polr2jO08740 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.11■■□□□ 1.61
Polr2jO08740 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Polr2jO08740 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.09■■□□□ 1.61
Polr2jO08740 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Polr2jO08740 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Polr2jO08740 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Polr2jO08740 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
Polr2jO08740 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Polr2jO08740 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Polr2jO08740 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Polr2jO08740 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms