Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm10553J3QPF1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm10553J3QPF1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm10553J3QPF1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
Gm10553J3QPF1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm10553J3QPF1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm10553J3QPF1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.15■□□□□ 0.98
Gm10553J3QPF1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Gm10553J3QPF1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm10553J3QPF1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm10553J3QPF1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm10553J3QPF1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Gm10553J3QPF1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Gm10553J3QPF1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm10553J3QPF1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.07■□□□□ 0.96
Gm10553J3QPF1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.04■□□□□ 0.96
Gm10553J3QPF1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm10553J3QPF1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm10553J3QPF1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm10553J3QPF1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.93■□□□□ 0.94
Gm10553J3QPF1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm10553J3QPF1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm10553J3QPF1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm10553J3QPF1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm10553J3QPF1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm10553J3QPF1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm10553J3QPF1 Gm26115-201ENSMUST00000175605 87 ntBASIC20.87■□□□□ 0.93
Gm10553J3QPF1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm10553J3QPF1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm10553J3QPF1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.81■□□□□ 0.92
Gm10553J3QPF1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm10553J3QPF1 Gm8109-201ENSMUST00000194076 746 ntBASIC20.8■□□□□ 0.92
Gm10553J3QPF1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm10553J3QPF1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm10553J3QPF1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm10553J3QPF1 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.72■□□□□ 0.91
Gm10553J3QPF1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm10553J3QPF1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm10553J3QPF1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm10553J3QPF1 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.69■□□□□ 0.9
Gm10553J3QPF1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm10553J3QPF1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Gm10553J3QPF1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.66■□□□□ 0.9
Gm10553J3QPF1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm10553J3QPF1 Gm27322-201ENSMUST00000184007 104 ntBASIC20.65■□□□□ 0.9
Gm10553J3QPF1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm10553J3QPF1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Gm10553J3QPF1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm10553J3QPF1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm10553J3QPF1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm10553J3QPF1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Gm10553J3QPF1 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.57■□□□□ 0.88
Gm10553J3QPF1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm10553J3QPF1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm10553J3QPF1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm10553J3QPF1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm10553J3QPF1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm10553J3QPF1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm10553J3QPF1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm10553J3QPF1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm10553J3QPF1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm10553J3QPF1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm10553J3QPF1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm10553J3QPF1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm10553J3QPF1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm10553J3QPF1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm10553J3QPF1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm10553J3QPF1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm10553J3QPF1 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.34■□□□□ 0.85
Gm10553J3QPF1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm10553J3QPF1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm10553J3QPF1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gm10553J3QPF1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm10553J3QPF1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm10553J3QPF1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm10553J3QPF1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm10553J3QPF1 Mipep-204ENSMUST00000225043 1548 ntBASIC20.26■□□□□ 0.83
Gm10553J3QPF1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10553J3QPF1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm10553J3QPF1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm10553J3QPF1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10553J3QPF1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm10553J3QPF1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm10553J3QPF1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.22■□□□□ 0.83
Gm10553J3QPF1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm10553J3QPF1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm10553J3QPF1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm10553J3QPF1 Gm24804-201ENSMUST00000174982 85 ntBASIC20.15■□□□□ 0.82
Gm10553J3QPF1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm10553J3QPF1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10553J3QPF1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10553J3QPF1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm10553J3QPF1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10553J3QPF1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm10553J3QPF1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm10553J3QPF1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10553J3QPF1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm10553J3QPF1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm10553J3QPF1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm10553J3QPF1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms