Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.02■■□□□ 1.76
TprF6ZDS4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26■■□□□ 1.75
TprF6ZDS4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.99■■□□□ 1.75
TprF6ZDS4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
TprF6ZDS4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.97■■□□□ 1.75
TprF6ZDS4 Gm27322-201ENSMUST00000184007 104 ntBASIC25.97■■□□□ 1.75
TprF6ZDS4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TprF6ZDS4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TprF6ZDS4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.94■■□□□ 1.74
TprF6ZDS4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TprF6ZDS4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
TprF6ZDS4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TprF6ZDS4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TprF6ZDS4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TprF6ZDS4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.79■■□□□ 1.72
TprF6ZDS4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TprF6ZDS4 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.77■■□□□ 1.72
TprF6ZDS4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TprF6ZDS4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TprF6ZDS4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TprF6ZDS4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TprF6ZDS4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TprF6ZDS4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TprF6ZDS4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TprF6ZDS4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.65■■□□□ 1.7
TprF6ZDS4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TprF6ZDS4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.63■■□□□ 1.69
TprF6ZDS4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TprF6ZDS4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.62■■□□□ 1.69
TprF6ZDS4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TprF6ZDS4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TprF6ZDS4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TprF6ZDS4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TprF6ZDS4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.55■■□□□ 1.68
TprF6ZDS4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.53■■□□□ 1.68
TprF6ZDS4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.47■■□□□ 1.67
TprF6ZDS4 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.45■■□□□ 1.67
TprF6ZDS4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TprF6ZDS4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TprF6ZDS4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.42■■□□□ 1.66
TprF6ZDS4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TprF6ZDS4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TprF6ZDS4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TprF6ZDS4 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.37■■□□□ 1.65
TprF6ZDS4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TprF6ZDS4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TprF6ZDS4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TprF6ZDS4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.33■■□□□ 1.64
TprF6ZDS4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
TprF6ZDS4 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.29■■□□□ 1.64
TprF6ZDS4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TprF6ZDS4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.25■■□□□ 1.63
TprF6ZDS4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TprF6ZDS4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TprF6ZDS4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
TprF6ZDS4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TprF6ZDS4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
TprF6ZDS4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TprF6ZDS4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TprF6ZDS4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TprF6ZDS4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TprF6ZDS4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
TprF6ZDS4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TprF6ZDS4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
TprF6ZDS4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TprF6ZDS4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TprF6ZDS4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TprF6ZDS4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.05■■□□□ 1.6
TprF6ZDS4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TprF6ZDS4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TprF6ZDS4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
TprF6ZDS4 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.94■■□□□ 1.58
TprF6ZDS4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TprF6ZDS4 Gm16148-201ENSMUST00000119653 893 ntBASIC24.92■■□□□ 1.58
TprF6ZDS4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TprF6ZDS4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TprF6ZDS4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
TprF6ZDS4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
TprF6ZDS4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TprF6ZDS4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
TprF6ZDS4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.83■■□□□ 1.57
TprF6ZDS4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TprF6ZDS4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
TprF6ZDS4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
TprF6ZDS4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TprF6ZDS4 Gm45855-201ENSMUST00000212546 880 ntBASIC24.78■■□□□ 1.56
TprF6ZDS4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TprF6ZDS4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TprF6ZDS4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TprF6ZDS4 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.76■■□□□ 1.55
TprF6ZDS4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TprF6ZDS4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms