Protein–RNA interactions for Protein: D3Z3N4

Hnrnph3, Heterogeneous nuclear ribonucleoprotein H3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnrnph3D3Z3N4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.78■■■□□ 2.36
Hnrnph3D3Z3N4 Gm25238-201ENSMUST00000174914 89 ntBASIC29.76■■■□□ 2.35
Hnrnph3D3Z3N4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Hnrnph3D3Z3N4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Hnrnph3D3Z3N4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.63■■■□□ 2.33
Hnrnph3D3Z3N4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Hnrnph3D3Z3N4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Hnrnph3D3Z3N4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.6■■■□□ 2.33
Hnrnph3D3Z3N4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Hnrnph3D3Z3N4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.57■■■□□ 2.32
Hnrnph3D3Z3N4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Hnrnph3D3Z3N4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.54■■■□□ 2.32
Hnrnph3D3Z3N4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Hnrnph3D3Z3N4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.48■■■□□ 2.31
Hnrnph3D3Z3N4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.47■■■□□ 2.31
Hnrnph3D3Z3N4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Hnrnph3D3Z3N4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Hnrnph3D3Z3N4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Hnrnph3D3Z3N4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Hnrnph3D3Z3N4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.32■■■□□ 2.28
Hnrnph3D3Z3N4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hnrnph3D3Z3N4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Hnrnph3D3Z3N4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Hnrnph3D3Z3N4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hnrnph3D3Z3N4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
Hnrnph3D3Z3N4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Hnrnph3D3Z3N4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hnrnph3D3Z3N4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Hnrnph3D3Z3N4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Hnrnph3D3Z3N4 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.17■■■□□ 2.26
Hnrnph3D3Z3N4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Hnrnph3D3Z3N4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.14■■■□□ 2.26
Hnrnph3D3Z3N4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hnrnph3D3Z3N4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
Hnrnph3D3Z3N4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Hnrnph3D3Z3N4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.04■■■□□ 2.24
Hnrnph3D3Z3N4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.23
Hnrnph3D3Z3N4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Hnrnph3D3Z3N4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
Hnrnph3D3Z3N4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Hnrnph3D3Z3N4 Rab21-202ENSMUST00000218831 843 ntBASIC28.94■■■□□ 2.22
Hnrnph3D3Z3N4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Hnrnph3D3Z3N4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Hnrnph3D3Z3N4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Hnrnph3D3Z3N4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Hnrnph3D3Z3N4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Hnrnph3D3Z3N4 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.89■■■□□ 2.21
Hnrnph3D3Z3N4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.85■■■□□ 2.21
Hnrnph3D3Z3N4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Hnrnph3D3Z3N4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Hnrnph3D3Z3N4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.81■■■□□ 2.2
Hnrnph3D3Z3N4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Hnrnph3D3Z3N4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Hnrnph3D3Z3N4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Hnrnph3D3Z3N4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Hnrnph3D3Z3N4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.72■■■□□ 2.19
Hnrnph3D3Z3N4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Hnrnph3D3Z3N4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Hnrnph3D3Z3N4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.7■■■□□ 2.18
Hnrnph3D3Z3N4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Hnrnph3D3Z3N4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.69■■■□□ 2.18
Hnrnph3D3Z3N4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Hnrnph3D3Z3N4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Hnrnph3D3Z3N4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
Hnrnph3D3Z3N4 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.65■■■□□ 2.18
Hnrnph3D3Z3N4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Hnrnph3D3Z3N4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Hnrnph3D3Z3N4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Hnrnph3D3Z3N4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Hnrnph3D3Z3N4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Hnrnph3D3Z3N4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.55■■■□□ 2.16
Hnrnph3D3Z3N4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.55■■■□□ 2.16
Hnrnph3D3Z3N4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.55■■■□□ 2.16
Hnrnph3D3Z3N4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hnrnph3D3Z3N4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Hnrnph3D3Z3N4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Hnrnph3D3Z3N4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Hnrnph3D3Z3N4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Hnrnph3D3Z3N4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Hnrnph3D3Z3N4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Hnrnph3D3Z3N4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Hnrnph3D3Z3N4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Hnrnph3D3Z3N4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.45■■■□□ 2.15
Hnrnph3D3Z3N4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Hnrnph3D3Z3N4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Hnrnph3D3Z3N4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Hnrnph3D3Z3N4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Hnrnph3D3Z3N4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Hnrnph3D3Z3N4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Hnrnph3D3Z3N4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Hnrnph3D3Z3N4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Hnrnph3D3Z3N4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.3■■■□□ 2.12
Hnrnph3D3Z3N4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Hnrnph3D3Z3N4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Hnrnph3D3Z3N4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Hnrnph3D3Z3N4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Hnrnph3D3Z3N4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Hnrnph3D3Z3N4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Hnrnph3D3Z3N4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Hnrnph3D3Z3N4 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms