Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.01■■□□□ 1.59
Hist1h2abC0HKE1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Hist1h2abC0HKE1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.93■■□□□ 1.58
Hist1h2abC0HKE1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Hist1h2abC0HKE1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.9■■□□□ 1.58
Hist1h2abC0HKE1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
Hist1h2abC0HKE1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Hist1h2abC0HKE1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hist1h2abC0HKE1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hist1h2abC0HKE1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hist1h2abC0HKE1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hist1h2abC0HKE1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Hist1h2abC0HKE1 Rab21-202ENSMUST00000218831 843 ntBASIC24.74■■□□□ 1.55
Hist1h2abC0HKE1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.73■■□□□ 1.55
Hist1h2abC0HKE1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Hist1h2abC0HKE1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Hist1h2abC0HKE1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hist1h2abC0HKE1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hist1h2abC0HKE1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hist1h2abC0HKE1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.6■■□□□ 1.53
Hist1h2abC0HKE1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Hist1h2abC0HKE1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hist1h2abC0HKE1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hist1h2abC0HKE1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hist1h2abC0HKE1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.52■■□□□ 1.52
Hist1h2abC0HKE1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hist1h2abC0HKE1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.49■■□□□ 1.51
Hist1h2abC0HKE1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hist1h2abC0HKE1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Hist1h2abC0HKE1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hist1h2abC0HKE1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hist1h2abC0HKE1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Hist1h2abC0HKE1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.42■■□□□ 1.5
Hist1h2abC0HKE1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Hist1h2abC0HKE1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Hist1h2abC0HKE1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Hist1h2abC0HKE1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Hist1h2abC0HKE1 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.37■■□□□ 1.49
Hist1h2abC0HKE1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hist1h2abC0HKE1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hist1h2abC0HKE1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Hist1h2abC0HKE1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Hist1h2abC0HKE1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Hist1h2abC0HKE1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Hist1h2abC0HKE1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Hist1h2abC0HKE1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hist1h2abC0HKE1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.28■■□□□ 1.48
Hist1h2abC0HKE1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Hist1h2abC0HKE1 Gm25262-201ENSMUST00000174934 133 ntBASIC24.25■■□□□ 1.47
Hist1h2abC0HKE1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Hist1h2abC0HKE1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Hist1h2abC0HKE1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Hist1h2abC0HKE1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Hist1h2abC0HKE1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Hist1h2abC0HKE1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Hist1h2abC0HKE1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Hist1h2abC0HKE1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.19■■□□□ 1.46
Hist1h2abC0HKE1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Hist1h2abC0HKE1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hist1h2abC0HKE1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.1■■□□□ 1.45
Hist1h2abC0HKE1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Hist1h2abC0HKE1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Hist1h2abC0HKE1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Hist1h2abC0HKE1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Hist1h2abC0HKE1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hist1h2abC0HKE1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Hist1h2abC0HKE1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Hist1h2abC0HKE1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Hist1h2abC0HKE1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hist1h2abC0HKE1 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.9■■□□□ 1.42
Hist1h2abC0HKE1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hist1h2abC0HKE1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hist1h2abC0HKE1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hist1h2abC0HKE1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hist1h2abC0HKE1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Hist1h2abC0HKE1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Hist1h2abC0HKE1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.83■■□□□ 1.41
Hist1h2abC0HKE1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Hist1h2abC0HKE1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Hist1h2abC0HKE1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2abC0HKE1 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.79■■□□□ 1.4
Hist1h2abC0HKE1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Hist1h2abC0HKE1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Hist1h2abC0HKE1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Hist1h2abC0HKE1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Hist1h2abC0HKE1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Hist1h2abC0HKE1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Hist1h2abC0HKE1 Mipep-204ENSMUST00000225043 1548 ntBASIC23.75■■□□□ 1.39
Hist1h2abC0HKE1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.75■■□□□ 1.39
Hist1h2abC0HKE1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Hist1h2abC0HKE1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Hist1h2abC0HKE1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hist1h2abC0HKE1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.73■■□□□ 1.39
Hist1h2abC0HKE1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.7■■□□□ 1.38
Hist1h2abC0HKE1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Hist1h2abC0HKE1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hist1h2abC0HKE1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hist1h2abC0HKE1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hist1h2abC0HKE1 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.67■■□□□ 1.38
Hist1h2abC0HKE1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms