Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Gm23366-201ENSMUST00000175022 89 ntBASIC19.79■□□□□ 0.76
Trdv2-1A0A0G2JGB9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.79■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdv2-1A0A0G2JGB9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trdv2-1A0A0G2JGB9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv2-1A0A0G2JGB9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trdv2-1A0A0G2JGB9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trdv2-1A0A0G2JGB9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trdv2-1A0A0G2JGB9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trdv2-1A0A0G2JGB9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trdv2-1A0A0G2JGB9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdv2-1A0A0G2JGB9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.53■□□□□ 0.72
Trdv2-1A0A0G2JGB9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdv2-1A0A0G2JGB9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trdv2-1A0A0G2JGB9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdv2-1A0A0G2JGB9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trdv2-1A0A0G2JGB9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trdv2-1A0A0G2JGB9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdv2-1A0A0G2JGB9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdv2-1A0A0G2JGB9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trdv2-1A0A0G2JGB9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trdv2-1A0A0G2JGB9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
Trdv2-1A0A0G2JGB9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdv2-1A0A0G2JGB9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdv2-1A0A0G2JGB9 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.26■□□□□ 0.67
Trdv2-1A0A0G2JGB9 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.24■□□□□ 0.67
Trdv2-1A0A0G2JGB9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdv2-1A0A0G2JGB9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdv2-1A0A0G2JGB9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trdv2-1A0A0G2JGB9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trdv2-1A0A0G2JGB9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.08■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trdv2-1A0A0G2JGB9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trdv2-1A0A0G2JGB9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Trdv2-1A0A0G2JGB9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.01■□□□□ 0.63
Trdv2-1A0A0G2JGB9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trdv2-1A0A0G2JGB9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trdv2-1A0A0G2JGB9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trdv2-1A0A0G2JGB9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.95■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.94■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trdv2-1A0A0G2JGB9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
Trdv2-1A0A0G2JGB9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.88■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms