Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,52■■□□□ 1,04
Trav7-5A0A0G2JFX6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21,51■■□□□ 1,03
Trav7-5A0A0G2JFX6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,49■■□□□ 1,03
Trav7-5A0A0G2JFX6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,47■■□□□ 1,03
Trav7-5A0A0G2JFX6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21,47■■□□□ 1,03
Trav7-5A0A0G2JFX6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21,45■■□□□ 1,02
Trav7-5A0A0G2JFX6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21,45■■□□□ 1,02
Trav7-5A0A0G2JFX6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21,45■■□□□ 1,02
Trav7-5A0A0G2JFX6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,41■■□□□ 1,02
Trav7-5A0A0G2JFX6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21,41■■□□□ 1,02
Trav7-5A0A0G2JFX6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,4■■□□□ 1,02
Trav7-5A0A0G2JFX6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21,4■■□□□ 1,02
Trav7-5A0A0G2JFX6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Trav7-5A0A0G2JFX6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,38■■□□□ 1,01
Trav7-5A0A0G2JFX6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Trav7-5A0A0G2JFX6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,31■■□□□ 1
Trav7-5A0A0G2JFX6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,31■■□□□ 1
Trav7-5A0A0G2JFX6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,3■■□□□ 1
Trav7-5A0A0G2JFX6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,3■■□□□ 1
Trav7-5A0A0G2JFX6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Trav7-5A0A0G2JFX6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav7-5A0A0G2JFX6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav7-5A0A0G2JFX6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav7-5A0A0G2JFX6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Trav7-5A0A0G2JFX6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Trav7-5A0A0G2JFX6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21,23■□□□□ 0,99
Trav7-5A0A0G2JFX6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21,22■□□□□ 0,99
Trav7-5A0A0G2JFX6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Trav7-5A0A0G2JFX6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Trav7-5A0A0G2JFX6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Trav7-5A0A0G2JFX6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Trav7-5A0A0G2JFX6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21,17■□□□□ 0,98
Trav7-5A0A0G2JFX6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21,15■□□□□ 0,98
Trav7-5A0A0G2JFX6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Trav7-5A0A0G2JFX6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Trav7-5A0A0G2JFX6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Trav7-5A0A0G2JFX6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,12■□□□□ 0,97
Trav7-5A0A0G2JFX6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Trav7-5A0A0G2JFX6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,08■□□□□ 0,96
Trav7-5A0A0G2JFX6 Gm26115-201ENSMUST00000175605 87 ntBASIC21,07■□□□□ 0,96
Trav7-5A0A0G2JFX6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,07■□□□□ 0,96
Trav7-5A0A0G2JFX6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Trav7-5A0A0G2JFX6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21,02■□□□□ 0,96
Trav7-5A0A0G2JFX6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21,02■□□□□ 0,96
Trav7-5A0A0G2JFX6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,01■□□□□ 0,95
Trav7-5A0A0G2JFX6 Zfp131-207ENSMUST00000224946 1783 ntBASIC21,01■□□□□ 0,95
Trav7-5A0A0G2JFX6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21,01■□□□□ 0,95
Trav7-5A0A0G2JFX6 Gm17082-201ENSMUST00000166043 1091 ntBASIC20,97■□□□□ 0,95
Trav7-5A0A0G2JFX6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20,95■□□□□ 0,94
Trav7-5A0A0G2JFX6 Gm27322-201ENSMUST00000184007 104 ntBASIC20,94■□□□□ 0,94
Trav7-5A0A0G2JFX6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20,94■□□□□ 0,94
Trav7-5A0A0G2JFX6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20,93■□□□□ 0,94
Trav7-5A0A0G2JFX6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20,93■□□□□ 0,94
Trav7-5A0A0G2JFX6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Trav7-5A0A0G2JFX6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Trav7-5A0A0G2JFX6 Gm8109-201ENSMUST00000194076 746 ntBASIC20,9■□□□□ 0,94
Trav7-5A0A0G2JFX6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20,89■□□□□ 0,94
Trav7-5A0A0G2JFX6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20,87■□□□□ 0,93
Trav7-5A0A0G2JFX6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20,86■□□□□ 0,93
Trav7-5A0A0G2JFX6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,85■□□□□ 0,93
Trav7-5A0A0G2JFX6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20,85■□□□□ 0,93
Trav7-5A0A0G2JFX6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20,85■□□□□ 0,93
Trav7-5A0A0G2JFX6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Trav7-5A0A0G2JFX6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,8■□□□□ 0,92
Trav7-5A0A0G2JFX6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20,8■□□□□ 0,92
Trav7-5A0A0G2JFX6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20,79■□□□□ 0,92
Trav7-5A0A0G2JFX6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Trav7-5A0A0G2JFX6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,77■□□□□ 0,91
Trav7-5A0A0G2JFX6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20,74■□□□□ 0,91
Trav7-5A0A0G2JFX6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20,74■□□□□ 0,91
Trav7-5A0A0G2JFX6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20,72■□□□□ 0,91
Trav7-5A0A0G2JFX6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20,71■□□□□ 0,91
Trav7-5A0A0G2JFX6 AC166822.3-201ENSMUST00000227394 661 ntBASIC20,7■□□□□ 0,9
Trav7-5A0A0G2JFX6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20,68■□□□□ 0,9
Trav7-5A0A0G2JFX6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20,66■□□□□ 0,9
Trav7-5A0A0G2JFX6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20,66■□□□□ 0,9
Trav7-5A0A0G2JFX6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,89
Trav7-5A0A0G2JFX6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20,62■□□□□ 0,89
Trav7-5A0A0G2JFX6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20,62■□□□□ 0,89
Trav7-5A0A0G2JFX6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,61■□□□□ 0,89
Trav7-5A0A0G2JFX6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20,59■□□□□ 0,89
Trav7-5A0A0G2JFX6 Mipep-204ENSMUST00000225043 1548 ntBASIC20,58■□□□□ 0,88
Trav7-5A0A0G2JFX6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20,57■□□□□ 0,88
Trav7-5A0A0G2JFX6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20,57■□□□□ 0,88
Trav7-5A0A0G2JFX6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20,55■□□□□ 0,88
Trav7-5A0A0G2JFX6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20,53■□□□□ 0,88
Trav7-5A0A0G2JFX6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20,53■□□□□ 0,88
Trav7-5A0A0G2JFX6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,51■□□□□ 0,87
Trav7-5A0A0G2JFX6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Trav7-5A0A0G2JFX6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Trav7-5A0A0G2JFX6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Trav7-5A0A0G2JFX6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Trav7-5A0A0G2JFX6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20,44■□□□□ 0,86
Trav7-5A0A0G2JFX6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20,43■□□□□ 0,86
Trav7-5A0A0G2JFX6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,42■□□□□ 0,86
Trav7-5A0A0G2JFX6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20,42■□□□□ 0,86
Trav7-5A0A0G2JFX6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20,42■□□□□ 0,86
Trav7-5A0A0G2JFX6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20,4■□□□□ 0,86
Trav7-5A0A0G2JFX6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,4■□□□□ 0,86
Trav7-5A0A0G2JFX6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20,39■□□□□ 0,86
Retrieved 100 of 76,532 protein–RNA pairs in 12,6 ms