Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav13d-4A0A0G2JFX3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav13d-4A0A0G2JFX3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13d-4A0A0G2JFX3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.6■□□□□ 0.57
Trav13d-4A0A0G2JFX3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13d-4A0A0G2JFX3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav13d-4A0A0G2JFX3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav13d-4A0A0G2JFX3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13d-4A0A0G2JFX3 Gm25238-201ENSMUST00000174914 89 ntBASIC18.5■□□□□ 0.55
Trav13d-4A0A0G2JFX3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav13d-4A0A0G2JFX3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav13d-4A0A0G2JFX3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.43■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.42■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav13d-4A0A0G2JFX3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13d-4A0A0G2JFX3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-4A0A0G2JFX3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-4A0A0G2JFX3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-4A0A0G2JFX3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.34■□□□□ 0.53
Trav13d-4A0A0G2JFX3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-4A0A0G2JFX3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13d-4A0A0G2JFX3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13d-4A0A0G2JFX3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13d-4A0A0G2JFX3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13d-4A0A0G2JFX3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav13d-4A0A0G2JFX3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav13d-4A0A0G2JFX3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav13d-4A0A0G2JFX3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.14■□□□□ 0.5
Trav13d-4A0A0G2JFX3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Trav13d-4A0A0G2JFX3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13d-4A0A0G2JFX3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-4A0A0G2JFX3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav13d-4A0A0G2JFX3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trav13d-4A0A0G2JFX3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-4A0A0G2JFX3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13d-4A0A0G2JFX3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13d-4A0A0G2JFX3 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.04■□□□□ 0.48
Trav13d-4A0A0G2JFX3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13d-4A0A0G2JFX3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Rab21-202ENSMUST00000218831 843 ntBASIC17.99■□□□□ 0.47
Trav13d-4A0A0G2JFX3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav13d-4A0A0G2JFX3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Trav13d-4A0A0G2JFX3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav13d-4A0A0G2JFX3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.93■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.91■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav13d-4A0A0G2JFX3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav13d-4A0A0G2JFX3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13d-4A0A0G2JFX3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13d-4A0A0G2JFX3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13d-4A0A0G2JFX3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms