Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav13n-1A0A0G2JEU8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav13n-1A0A0G2JEU8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.78■□□□□ 0.76
Trav13n-1A0A0G2JEU8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav13n-1A0A0G2JEU8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav13n-1A0A0G2JEU8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.73■□□□□ 0.75
Trav13n-1A0A0G2JEU8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav13n-1A0A0G2JEU8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav13n-1A0A0G2JEU8 Gm8109-201ENSMUST00000194076 746 ntBASIC19.7■□□□□ 0.74
Trav13n-1A0A0G2JEU8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.7■□□□□ 0.74
Trav13n-1A0A0G2JEU8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trav13n-1A0A0G2JEU8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav13n-1A0A0G2JEU8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav13n-1A0A0G2JEU8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trav13n-1A0A0G2JEU8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13n-1A0A0G2JEU8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav13n-1A0A0G2JEU8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Trav13n-1A0A0G2JEU8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13n-1A0A0G2JEU8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13n-1A0A0G2JEU8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-1A0A0G2JEU8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13n-1A0A0G2JEU8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.5■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.46■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
Trav13n-1A0A0G2JEU8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Gm27322-201ENSMUST00000184007 104 ntBASIC19.42■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav13n-1A0A0G2JEU8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13n-1A0A0G2JEU8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13n-1A0A0G2JEU8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13n-1A0A0G2JEU8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav13n-1A0A0G2JEU8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13n-1A0A0G2JEU8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav13n-1A0A0G2JEU8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trav13n-1A0A0G2JEU8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-1A0A0G2JEU8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav13n-1A0A0G2JEU8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav13n-1A0A0G2JEU8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav13n-1A0A0G2JEU8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav13n-1A0A0G2JEU8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav13n-1A0A0G2JEU8 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.14■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav13n-1A0A0G2JEU8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.08■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Gm24804-201ENSMUST00000174982 85 ntBASIC19.06■□□□□ 0.64
Trav13n-1A0A0G2JEU8 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.06■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.02■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13n-1A0A0G2JEU8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13n-1A0A0G2JEU8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13n-1A0A0G2JEU8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19■□□□□ 0.63
Trav13n-1A0A0G2JEU8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13n-1A0A0G2JEU8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13n-1A0A0G2JEU8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13n-1A0A0G2JEU8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13n-1A0A0G2JEU8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.91■□□□□ 0.62
Trav13n-1A0A0G2JEU8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trav13n-1A0A0G2JEU8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav13n-1A0A0G2JEU8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav13n-1A0A0G2JEU8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav13n-1A0A0G2JEU8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav13n-1A0A0G2JEU8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav13n-1A0A0G2JEU8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav13n-1A0A0G2JEU8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav13n-1A0A0G2JEU8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav13n-1A0A0G2JEU8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13n-1A0A0G2JEU8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Mipep-204ENSMUST00000225043 1548 ntBASIC18.73■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav13n-1A0A0G2JEU8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav13n-1A0A0G2JEU8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms