Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.68■■□□□ 1.22
Ighv1-47A0A0A6YY41 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ighv1-47A0A0A6YY41 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.61■■□□□ 1.21
Ighv1-47A0A0A6YY41 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-47A0A0A6YY41 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.58■■□□□ 1.21
Ighv1-47A0A0A6YY41 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ighv1-47A0A0A6YY41 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-47A0A0A6YY41 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.57■■□□□ 1.2
Ighv1-47A0A0A6YY41 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ighv1-47A0A0A6YY41 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ighv1-47A0A0A6YY41 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-47A0A0A6YY41 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-47A0A0A6YY41 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-47A0A0A6YY41 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ighv1-47A0A0A6YY41 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ighv1-47A0A0A6YY41 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-47A0A0A6YY41 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-47A0A0A6YY41 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-47A0A0A6YY41 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv1-47A0A0A6YY41 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-47A0A0A6YY41 Rab21-202ENSMUST00000218831 843 ntBASIC22.39■■□□□ 1.17
Ighv1-47A0A0A6YY41 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Ighv1-47A0A0A6YY41 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.33■■□□□ 1.16
Ighv1-47A0A0A6YY41 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ighv1-47A0A0A6YY41 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-47A0A0A6YY41 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.29■■□□□ 1.16
Ighv1-47A0A0A6YY41 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-47A0A0A6YY41 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ighv1-47A0A0A6YY41 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.25■■□□□ 1.15
Ighv1-47A0A0A6YY41 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-47A0A0A6YY41 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-47A0A0A6YY41 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv1-47A0A0A6YY41 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.17■■□□□ 1.14
Ighv1-47A0A0A6YY41 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-47A0A0A6YY41 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ighv1-47A0A0A6YY41 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ighv1-47A0A0A6YY41 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-47A0A0A6YY41 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.11■■□□□ 1.13
Ighv1-47A0A0A6YY41 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ighv1-47A0A0A6YY41 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-47A0A0A6YY41 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-47A0A0A6YY41 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.06■■□□□ 1.12
Ighv1-47A0A0A6YY41 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.03■■□□□ 1.12
Ighv1-47A0A0A6YY41 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv1-47A0A0A6YY41 Gm25262-201ENSMUST00000174934 133 ntBASIC22.02■■□□□ 1.12
Ighv1-47A0A0A6YY41 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-47A0A0A6YY41 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-47A0A0A6YY41 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-47A0A0A6YY41 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.99■■□□□ 1.11
Ighv1-47A0A0A6YY41 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ighv1-47A0A0A6YY41 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Ighv1-47A0A0A6YY41 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ighv1-47A0A0A6YY41 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-47A0A0A6YY41 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv1-47A0A0A6YY41 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.93■■□□□ 1.1
Ighv1-47A0A0A6YY41 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ighv1-47A0A0A6YY41 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ighv1-47A0A0A6YY41 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-47A0A0A6YY41 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-47A0A0A6YY41 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-47A0A0A6YY41 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ighv1-47A0A0A6YY41 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-47A0A0A6YY41 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.85■■□□□ 1.09
Ighv1-47A0A0A6YY41 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-47A0A0A6YY41 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.84■■□□□ 1.09
Ighv1-47A0A0A6YY41 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.81■■□□□ 1.08
Ighv1-47A0A0A6YY41 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv1-47A0A0A6YY41 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Ighv1-47A0A0A6YY41 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-47A0A0A6YY41 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.7■■□□□ 1.06
Ighv1-47A0A0A6YY41 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ighv1-47A0A0A6YY41 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ighv1-47A0A0A6YY41 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ighv1-47A0A0A6YY41 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ighv1-47A0A0A6YY41 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ighv1-47A0A0A6YY41 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ighv1-47A0A0A6YY41 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.63■■□□□ 1.05
Ighv1-47A0A0A6YY41 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Ighv1-47A0A0A6YY41 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ighv1-47A0A0A6YY41 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ighv1-47A0A0A6YY41 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.61■■□□□ 1.05
Ighv1-47A0A0A6YY41 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ighv1-47A0A0A6YY41 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.6■■□□□ 1.05
Ighv1-47A0A0A6YY41 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-47A0A0A6YY41 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-47A0A0A6YY41 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ighv1-47A0A0A6YY41 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-47A0A0A6YY41 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ighv1-47A0A0A6YY41 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ighv1-47A0A0A6YY41 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-47A0A0A6YY41 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-47A0A0A6YY41 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ighv1-47A0A0A6YY41 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ighv1-47A0A0A6YY41 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv1-47A0A0A6YY41 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ighv1-47A0A0A6YY41 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv1-47A0A0A6YY41 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.51■■□□□ 1.03
Ighv1-47A0A0A6YY41 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ighv1-47A0A0A6YY41 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-47A0A0A6YY41 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms