Protein–RNA interactions for Protein: A0A087WRT7

Ms4a4a, Membrane-spanning 4-domains, subfamily A, member 4A, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a4aA0A087WRT7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ms4a4aA0A087WRT7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ms4a4aA0A087WRT7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ms4a4aA0A087WRT7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Ms4a4aA0A087WRT7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ms4a4aA0A087WRT7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
Ms4a4aA0A087WRT7 Zfp131-205ENSMUST00000223812 663 ntBASIC31.62■■■□□ 2.65
Ms4a4aA0A087WRT7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ms4a4aA0A087WRT7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ms4a4aA0A087WRT7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ms4a4aA0A087WRT7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ms4a4aA0A087WRT7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Ms4a4aA0A087WRT7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ms4a4aA0A087WRT7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ms4a4aA0A087WRT7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.45■■■□□ 2.63
Ms4a4aA0A087WRT7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.44■■■□□ 2.62
Ms4a4aA0A087WRT7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ms4a4aA0A087WRT7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ms4a4aA0A087WRT7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.41■■■□□ 2.62
Ms4a4aA0A087WRT7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ms4a4aA0A087WRT7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ms4a4aA0A087WRT7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Ms4a4aA0A087WRT7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31.3■■■□□ 2.6
Ms4a4aA0A087WRT7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Ms4a4aA0A087WRT7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ms4a4aA0A087WRT7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ms4a4aA0A087WRT7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ms4a4aA0A087WRT7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.2■■■□□ 2.59
Ms4a4aA0A087WRT7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ms4a4aA0A087WRT7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Ms4a4aA0A087WRT7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ms4a4aA0A087WRT7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ms4a4aA0A087WRT7 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.07■■■□□ 2.56
Ms4a4aA0A087WRT7 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.06■■■□□ 2.56
Ms4a4aA0A087WRT7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ms4a4aA0A087WRT7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
Ms4a4aA0A087WRT7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Ms4a4aA0A087WRT7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ms4a4aA0A087WRT7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Ms4a4aA0A087WRT7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Ms4a4aA0A087WRT7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ms4a4aA0A087WRT7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31■■■□□ 2.55
Ms4a4aA0A087WRT7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Ms4a4aA0A087WRT7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Ms4a4aA0A087WRT7 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.95■■■□□ 2.54
Ms4a4aA0A087WRT7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Ms4a4aA0A087WRT7 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.83■■■□□ 2.53
Ms4a4aA0A087WRT7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Ms4a4aA0A087WRT7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ms4a4aA0A087WRT7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ms4a4aA0A087WRT7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Ms4a4aA0A087WRT7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.74■■■□□ 2.51
Ms4a4aA0A087WRT7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Ms4a4aA0A087WRT7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ms4a4aA0A087WRT7 Gm16148-201ENSMUST00000119653 893 ntBASIC30.71■■■□□ 2.51
Ms4a4aA0A087WRT7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ms4a4aA0A087WRT7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Ms4a4aA0A087WRT7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ms4a4aA0A087WRT7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ms4a4aA0A087WRT7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.67■■■□□ 2.5
Ms4a4aA0A087WRT7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Ms4a4aA0A087WRT7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.63■■■□□ 2.49
Ms4a4aA0A087WRT7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Ms4a4aA0A087WRT7 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.61■■■□□ 2.49
Ms4a4aA0A087WRT7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ms4a4aA0A087WRT7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ms4a4aA0A087WRT7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.56■■■□□ 2.48
Ms4a4aA0A087WRT7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ms4a4aA0A087WRT7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ms4a4aA0A087WRT7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ms4a4aA0A087WRT7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
Ms4a4aA0A087WRT7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Ms4a4aA0A087WRT7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Ms4a4aA0A087WRT7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ms4a4aA0A087WRT7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Ms4a4aA0A087WRT7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ms4a4aA0A087WRT7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ms4a4aA0A087WRT7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.42■■■□□ 2.46
Ms4a4aA0A087WRT7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ms4a4aA0A087WRT7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Ms4a4aA0A087WRT7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ms4a4aA0A087WRT7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.36■■■□□ 2.45
Ms4a4aA0A087WRT7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ms4a4aA0A087WRT7 Peli2-204ENSMUST00000226513 1320 ntBASIC30.35■■■□□ 2.45
Ms4a4aA0A087WRT7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ms4a4aA0A087WRT7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Ms4a4aA0A087WRT7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.32■■■□□ 2.44
Ms4a4aA0A087WRT7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Ms4a4aA0A087WRT7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ms4a4aA0A087WRT7 Gm45855-201ENSMUST00000212546 880 ntBASIC30.26■■■□□ 2.43
Ms4a4aA0A087WRT7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Ms4a4aA0A087WRT7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Ms4a4aA0A087WRT7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ms4a4aA0A087WRT7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ms4a4aA0A087WRT7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ms4a4aA0A087WRT7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
Ms4a4aA0A087WRT7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ms4a4aA0A087WRT7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ms4a4aA0A087WRT7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Ms4a4aA0A087WRT7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms