Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.13■■□□□ 1.61
Trav12n-2A0A075B626 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Trav12n-2A0A075B626 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.12■■□□□ 1.61
Trav12n-2A0A075B626 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Trav12n-2A0A075B626 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Trav12n-2A0A075B626 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Trav12n-2A0A075B626 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trav12n-2A0A075B626 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Trav12n-2A0A075B626 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trav12n-2A0A075B626 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.01■■□□□ 1.59
Trav12n-2A0A075B626 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25■■□□□ 1.59
Trav12n-2A0A075B626 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Trav12n-2A0A075B626 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Trav12n-2A0A075B626 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trav12n-2A0A075B626 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Trav12n-2A0A075B626 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Trav12n-2A0A075B626 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trav12n-2A0A075B626 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trav12n-2A0A075B626 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trav12n-2A0A075B626 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.82■■□□□ 1.56
Trav12n-2A0A075B626 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trav12n-2A0A075B626 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Trav12n-2A0A075B626 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Trav12n-2A0A075B626 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trav12n-2A0A075B626 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trav12n-2A0A075B626 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
Trav12n-2A0A075B626 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Trav12n-2A0A075B626 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.68■■□□□ 1.54
Trav12n-2A0A075B626 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.67■■□□□ 1.54
Trav12n-2A0A075B626 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trav12n-2A0A075B626 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trav12n-2A0A075B626 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.59■■□□□ 1.53
Trav12n-2A0A075B626 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.58■■□□□ 1.53
Trav12n-2A0A075B626 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trav12n-2A0A075B626 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trav12n-2A0A075B626 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.55■■□□□ 1.52
Trav12n-2A0A075B626 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trav12n-2A0A075B626 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trav12n-2A0A075B626 Gm26115-201ENSMUST00000175605 87 ntBASIC24.47■■□□□ 1.51
Trav12n-2A0A075B626 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.46■■□□□ 1.51
Trav12n-2A0A075B626 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trav12n-2A0A075B626 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trav12n-2A0A075B626 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trav12n-2A0A075B626 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Trav12n-2A0A075B626 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trav12n-2A0A075B626 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trav12n-2A0A075B626 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trav12n-2A0A075B626 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trav12n-2A0A075B626 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trav12n-2A0A075B626 Gm8109-201ENSMUST00000194076 746 ntBASIC24.38■■□□□ 1.49
Trav12n-2A0A075B626 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trav12n-2A0A075B626 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trav12n-2A0A075B626 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trav12n-2A0A075B626 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav12n-2A0A075B626 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.35■■□□□ 1.49
Trav12n-2A0A075B626 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Trav12n-2A0A075B626 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trav12n-2A0A075B626 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Trav12n-2A0A075B626 Gm27322-201ENSMUST00000184007 104 ntBASIC24.33■■□□□ 1.49
Trav12n-2A0A075B626 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trav12n-2A0A075B626 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trav12n-2A0A075B626 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trav12n-2A0A075B626 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
Trav12n-2A0A075B626 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.27■■□□□ 1.48
Trav12n-2A0A075B626 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trav12n-2A0A075B626 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Trav12n-2A0A075B626 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trav12n-2A0A075B626 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trav12n-2A0A075B626 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trav12n-2A0A075B626 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Trav12n-2A0A075B626 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Trav12n-2A0A075B626 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.12■■□□□ 1.45
Trav12n-2A0A075B626 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Trav12n-2A0A075B626 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.09■■□□□ 1.45
Trav12n-2A0A075B626 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Trav12n-2A0A075B626 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Trav12n-2A0A075B626 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Trav12n-2A0A075B626 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Trav12n-2A0A075B626 Mipep-204ENSMUST00000225043 1548 ntBASIC24.01■■□□□ 1.43
Trav12n-2A0A075B626 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trav12n-2A0A075B626 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trav12n-2A0A075B626 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trav12n-2A0A075B626 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trav12n-2A0A075B626 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Trav12n-2A0A075B626 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trav12n-2A0A075B626 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trav12n-2A0A075B626 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trav12n-2A0A075B626 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trav12n-2A0A075B626 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trav12n-2A0A075B626 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav12n-2A0A075B626 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav12n-2A0A075B626 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav12n-2A0A075B626 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trav12n-2A0A075B626 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.81■■□□□ 1.4
Trav12n-2A0A075B626 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trav12n-2A0A075B626 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trav12n-2A0A075B626 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.79■■□□□ 1.4
Trav12n-2A0A075B626 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trav12n-2A0A075B626 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trav12n-2A0A075B626 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms