Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb3Q91XZ7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb3Q91XZ7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb3Q91XZ7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb3Q91XZ7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gm5133-201ENSMUST00000118940 1255 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gm28925-201ENSMUST00000188586 168 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gm16476-201ENSMUST00000221544 139 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb3Q91XZ7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Gm12752-201ENSMUST00000121657 811 ntBASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Gm15487-201ENSMUST00000122373 465 ntBASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb3Q91XZ7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms