Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm22121-201ENSMUST00000175148 54 ntBASIC16.42■□□□□ 0.22
Clcn1Q64347 Mir6979-201ENSMUST00000183927 56 ntBASIC16.42■□□□□ 0.22
Clcn1Q64347 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm18041-201ENSMUST00000218210 618 ntBASIC16.42■□□□□ 0.22
Clcn1Q64347 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.42■□□□□ 0.22
Clcn1Q64347 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.42■□□□□ 0.22
Clcn1Q64347 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn1Q64347 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Clcn1Q64347 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm13570-201ENSMUST00000140763 309 ntBASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm26956-201ENSMUST00000182176 986 ntBASIC16.41■□□□□ 0.22
Clcn1Q64347 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Clcn1Q64347 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn1Q64347 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Clcn1Q64347 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Clcn1Q64347 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clcn1Q64347 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.4■□□□□ 0.22
Clcn1Q64347 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm2546-201ENSMUST00000182630 991 ntBASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.4■□□□□ 0.22
Clcn1Q64347 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC16.4■□□□□ 0.22
Clcn1Q64347 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.4■□□□□ 0.22
Clcn1Q64347 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn1Q64347 Gm43061-201ENSMUST00000198850 2241 ntBASIC16.39■□□□□ 0.22
Clcn1Q64347 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clcn1Q64347 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gm14704-201ENSMUST00000120300 874 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gm14017-201ENSMUST00000121934 386 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms