Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm44344-201ENSMUST00000200287 129 ntBASIC12.56□□□□□ -0.4
Msx2Q03358 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.56□□□□□ -0.4
Msx2Q03358 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.56□□□□□ -0.4
Msx2Q03358 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Msx2Q03358 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.56□□□□□ -0.4
Msx2Q03358 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Msx2Q03358 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Msx2Q03358 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx2Q03358 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.55□□□□□ -0.4
Msx2Q03358 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm3436-201ENSMUST00000179930 840 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm27618-201ENSMUST00000183671 60 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm27772-201ENSMUST00000184900 187 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm17795-201ENSMUST00000214505 757 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.55□□□□□ -0.4
Msx2Q03358 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.55□□□□□ -0.4
Msx2Q03358 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx2Q03358 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx2Q03358 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Gm29608-201ENSMUST00000190444 463 ntBASIC12.54□□□□□ -0.4
Msx2Q03358 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Gm5312-201ENSMUST00000203728 547 ntBASIC12.54□□□□□ -0.4
Msx2Q03358 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx2Q03358 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.54□□□□□ -0.4
Msx2Q03358 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.54□□□□□ -0.4
Msx2Q03358 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Chchd1-203ENSMUST00000224633 557 ntBASIC12.54□□□□□ -0.4
Msx2Q03358 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx2Q03358 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms