Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cacna1aP97445 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.95□□□□□ -0.5
Cacna1aP97445 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.95□□□□□ -0.5
Cacna1aP97445 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.95□□□□□ -0.5
Cacna1aP97445 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.95□□□□□ -0.5
Cacna1aP97445 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.95□□□□□ -0.5
Cacna1aP97445 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cacna1aP97445 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cacna1aP97445 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm13736-201ENSMUST00000119272 253 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.94□□□□□ -0.5
Cacna1aP97445 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cacna1aP97445 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.94□□□□□ -0.5
Cacna1aP97445 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cacna1aP97445 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cacna1aP97445 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.93□□□□□ -0.5
Cacna1aP97445 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cacna1aP97445 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cacna1aP97445 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.93□□□□□ -0.5
Cacna1aP97445 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cacna1aP97445 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.93□□□□□ -0.5
Cacna1aP97445 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.93□□□□□ -0.5
Cacna1aP97445 Daam2-202ENSMUST00000224595 1926 ntBASIC11.93□□□□□ -0.5
Cacna1aP97445 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.93□□□□□ -0.5
Cacna1aP97445 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms