Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pdlim4P70271 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pdlim4P70271 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.81□□□□□ -0.68
Pdlim4P70271 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.81□□□□□ -0.68
Pdlim4P70271 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm8602-201ENSMUST00000184045 607 ntBASIC10.81□□□□□ -0.68
Pdlim4P70271 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.81□□□□□ -0.68
Pdlim4P70271 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.81□□□□□ -0.68
Pdlim4P70271 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.81□□□□□ -0.68
Pdlim4P70271 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pdlim4P70271 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Pdlim4P70271 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.8□□□□□ -0.68
Pdlim4P70271 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.8□□□□□ -0.68
Pdlim4P70271 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pdlim4P70271 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pdlim4P70271 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms