Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm24543-201ENSMUST00000103867 82 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm13823-201ENSMUST00000119930 345 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.15□□□□□ -0.62
Slc6a1P31648 AA619741-201ENSMUST00000195095 646 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc6a1P31648 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.15□□□□□ -0.63
Slc6a1P31648 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Slc6a1P31648 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.15□□□□□ -0.63
Slc6a1P31648 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc6a1P31648 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc6a1P31648 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm6888-201ENSMUST00000221983 706 ntBASIC11.14□□□□□ -0.63
Slc6a1P31648 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.14□□□□□ -0.63
Slc6a1P31648 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.14□□□□□ -0.63
Slc6a1P31648 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.14□□□□□ -0.63
Slc6a1P31648 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc6a1P31648 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Slc6a1P31648 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.13□□□□□ -0.63
Slc6a1P31648 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Slc6a1P31648 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Slc6a1P31648 Gm6222-201ENSMUST00000120787 396 ntBASIC11.13□□□□□ -0.63
Slc6a1P31648 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms