Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC023310.3-201ENST00000557027 670 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC243562.2-201ENST00000561247 970 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC100756.1-201ENST00000562736 682 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC138749.3-201ENST00000567691 622 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AC116165.1-201ENST00000611806 668 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40ALP0C0E4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 AL691432.1-201ENST00000596308 1422 ntBASIC15.07■□□□□ 0
RAB40ALP0C0E4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.07■□□□□ 0
RAB40ALP0C0E4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 EEF1DP4-201ENST00000446006 880 ntBASIC15.06■□□□□ 0
RAB40ALP0C0E4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 GIMAP3P-201ENST00000495150 836 ntBASIC15.06■□□□□ 0
RAB40ALP0C0E4 MEIS3P1-201ENST00000495167 958 ntBASIC15.06■□□□□ 0
RAB40ALP0C0E4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 AL359881.2-201ENST00000602973 570 ntBASIC15.06■□□□□ 0
RAB40ALP0C0E4 AC093726.1-201ENST00000608064 963 ntBASIC15.06■□□□□ 0
RAB40ALP0C0E4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40ALP0C0E4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.06■□□□□ 0
RAB40ALP0C0E4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RAB40ALP0C0E4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.05■□□□□ 0
RAB40ALP0C0E4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.05■□□□□ 0
RAB40ALP0C0E4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.05■□□□□ 0
RAB40ALP0C0E4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms