Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC19.19■□□□□ 0.66
NclP09405 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC19.19■□□□□ 0.66
NclP09405 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NclP09405 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NclP09405 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NclP09405 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC19.19■□□□□ 0.66
NclP09405 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC19.19■□□□□ 0.66
NclP09405 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Gm14371-201ENSMUST00000138925 1518 ntBASIC19.19■□□□□ 0.66
NclP09405 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
NclP09405 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
NclP09405 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
NclP09405 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NclP09405 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Gm24255-201ENSMUST00000104481 128 ntBASIC19.18■□□□□ 0.66
NclP09405 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NclP09405 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC19.18■□□□□ 0.66
NclP09405 Gm13316-201ENSMUST00000140537 691 ntBASIC19.18■□□□□ 0.66
NclP09405 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC19.18■□□□□ 0.66
NclP09405 Gm21769-201ENSMUST00000211922 111 ntBASIC19.18■□□□□ 0.66
NclP09405 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC19.18■□□□□ 0.66
NclP09405 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Gm38346-201ENSMUST00000192379 2639 ntBASIC19.18■□□□□ 0.66
NclP09405 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NclP09405 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NclP09405 Gm22323-201ENSMUST00000103832 109 ntBASIC19.17■□□□□ 0.66
NclP09405 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Gm14381-201ENSMUST00000122105 414 ntBASIC19.17■□□□□ 0.66
NclP09405 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.17■□□□□ 0.66
NclP09405 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NclP09405 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.17■□□□□ 0.66
NclP09405 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC19.17■□□□□ 0.66
NclP09405 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NclP09405 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NclP09405 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.16■□□□□ 0.66
NclP09405 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC19.16■□□□□ 0.66
NclP09405 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.16■□□□□ 0.66
NclP09405 Gm37259-201ENSMUST00000193903 849 ntBASIC19.16■□□□□ 0.66
NclP09405 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.16■□□□□ 0.66
NclP09405 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC19.16■□□□□ 0.66
NclP09405 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
NclP09405 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NclP09405 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms