Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3880A0A1B0GSB3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3880A0A1B0GSB3 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3880A0A1B0GSB3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Gm3880A0A1B0GSB3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3880A0A1B0GSB3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm15593-201ENSMUST00000122085 1008 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm27741-201ENSMUST00000185060 237 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm9172-201ENSMUST00000212092 954 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm9182-201ENSMUST00000217829 639 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Gm3880A0A1B0GSB3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Gm3880A0A1B0GSB3 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms