Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
U2af1Q9D883 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
U2af1Q9D883 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2af1Q9D883 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.03■□□□□ 0.32
U2af1Q9D883 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm42853-201ENSMUST00000201273 1387 ntBASIC17.03■□□□□ 0.32
U2af1Q9D883 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm18584-201ENSMUST00000203098 964 ntBASIC17.03■□□□□ 0.32
U2af1Q9D883 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm45331-201ENSMUST00000209868 554 ntBASIC17.03■□□□□ 0.32
U2af1Q9D883 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
U2af1Q9D883 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2af1Q9D883 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
U2af1Q9D883 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.02■□□□□ 0.32
U2af1Q9D883 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
U2af1Q9D883 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
U2af1Q9D883 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.02■□□□□ 0.32
U2af1Q9D883 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.02■□□□□ 0.32
U2af1Q9D883 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Gm6007-201ENSMUST00000208170 823 ntBASIC17.02■□□□□ 0.32
U2af1Q9D883 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.02■□□□□ 0.32
U2af1Q9D883 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
U2af1Q9D883 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2af1Q9D883 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC17.02■□□□□ 0.31
U2af1Q9D883 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2af1Q9D883 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Gm12291-201ENSMUST00000121627 311 ntBASIC17.01■□□□□ 0.31
U2af1Q9D883 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Gm8738-201ENSMUST00000172606 329 ntBASIC17.01■□□□□ 0.31
U2af1Q9D883 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Gm8099-201ENSMUST00000200510 742 ntBASIC17.01■□□□□ 0.31
U2af1Q9D883 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.01■□□□□ 0.31
U2af1Q9D883 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
U2af1Q9D883 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2af1Q9D883 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms