Protein–RNA interactions for Protein: Q02780

Nfia, Nuclear factor 1 A-type, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfiaQ02780 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfiaQ02780 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfiaQ02780 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.46□□□□□ -0.1
NfiaQ02780 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfiaQ02780 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfiaQ02780 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfiaQ02780 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfiaQ02780 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NfiaQ02780 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm7857-201ENSMUST00000117957 358 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Gm13665-201ENSMUST00000120830 528 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Gm12566-201ENSMUST00000121479 359 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.45□□□□□ -0.1
NfiaQ02780 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Mir6927-201ENSMUST00000184494 71 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Gm37986-201ENSMUST00000193285 383 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.45□□□□□ -0.1
NfiaQ02780 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.45□□□□□ -0.1
NfiaQ02780 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfiaQ02780 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.44□□□□□ -0.1
NfiaQ02780 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NfiaQ02780 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.44□□□□□ -0.1
NfiaQ02780 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NfiaQ02780 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NfiaQ02780 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Gm14109-201ENSMUST00000118814 309 ntBASIC14.44□□□□□ -0.1
NfiaQ02780 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NfiaQ02780 Gm3096-201ENSMUST00000185770 364 ntBASIC14.44□□□□□ -0.1
NfiaQ02780 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.44□□□□□ -0.1
NfiaQ02780 Gm44262-201ENSMUST00000204969 372 ntBASIC14.44□□□□□ -0.1
NfiaQ02780 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.44□□□□□ -0.1
NfiaQ02780 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.44□□□□□ -0.1
NfiaQ02780 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.44□□□□□ -0.1
NfiaQ02780 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NfiaQ02780 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NfiaQ02780 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NfiaQ02780 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms