Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Gm24548-201ENSMUST00000158650 108 ntBASIC12.92□□□□□ -0.34
Nckap1P28660 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nckap1P28660 Gm8738-201ENSMUST00000172606 329 ntBASIC12.92□□□□□ -0.34
Nckap1P28660 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nckap1P28660 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nckap1P28660 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nckap1P28660 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.91□□□□□ -0.34
Nckap1P28660 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm26083-201ENSMUST00000157904 193 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Gm6621-201ENSMUST00000193251 772 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Gm19931-201ENSMUST00000198920 368 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nckap1P28660 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.91□□□□□ -0.34
Nckap1P28660 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nckap1P28660 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nckap1P28660 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nckap1P28660 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms