Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Gm23363-201ENSMUST00000175024 79 ntBASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Snora73a-201ENSMUST00000082453 205 ntBASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upk3aQ9JKX8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Gm25857-201ENSMUST00000082788 129 ntBASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Upk3aQ9JKX8 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms