Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gm27838-201ENSMUST00000184829 128 ntBASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gm20445-201ENSMUST00000061905 565 ntBASIC12.3□□□□□ -0.44
Ska1Q9CPV1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ska1Q9CPV1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ska1Q9CPV1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm9522-201ENSMUST00000182394 926 ntBASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ska1Q9CPV1 Gm19931-201ENSMUST00000198920 368 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms