Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm6244-201ENSMUST00000178732 841 ntBASIC13.11□□□□□ -0.31
Clip4Q8CI96 Gm8602-201ENSMUST00000184045 607 ntBASIC13.11□□□□□ -0.31
Clip4Q8CI96 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clip4Q8CI96 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clip4Q8CI96 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Mir1894-201ENSMUST00000122802 81 ntBASIC13.1□□□□□ -0.31
Clip4Q8CI96 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.1□□□□□ -0.31
Clip4Q8CI96 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm17794-201ENSMUST00000220252 955 ntBASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clip4Q8CI96 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Clip4Q8CI96 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm38144-201ENSMUST00000192790 465 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.09□□□□□ -0.31
Clip4Q8CI96 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clip4Q8CI96 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.08□□□□□ -0.31
Clip4Q8CI96 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.08□□□□□ -0.31
Clip4Q8CI96 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clip4Q8CI96 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clip4Q8CI96 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms