Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm22323-201ENSMUST00000103832 109 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm24255-201ENSMUST00000104481 128 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm11978-201ENSMUST00000122315 466 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm17376-201ENSMUST00000166016 84 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Gm7046-201ENSMUST00000221351 977 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp20Q8C6M1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm15236-201ENSMUST00000117309 379 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm8738-201ENSMUST00000172606 329 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm37042-201ENSMUST00000193816 581 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm18584-201ENSMUST00000203098 964 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp20Q8C6M1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Mir877-201ENSMUST00000104738 85 ntBASIC14.37□□□□□ -0.11
Usp20Q8C6M1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp20Q8C6M1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms