Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col16a1Q8BLX7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Gm24934-201ENSMUST00000103764 111 ntBASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col16a1Q8BLX7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Col16a1Q8BLX7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.71■□□□□ 0.26
Col16a1Q8BLX7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col16a1Q8BLX7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Col16a1Q8BLX7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Gm14460-201ENSMUST00000121511 639 ntBASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Gm270-201ENSMUST00000223010 976 ntBASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Gm21811-201ENSMUST00000096485 930 ntBASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col16a1Q8BLX7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col16a1Q8BLX7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms