Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.23□□□□□ -0.13
Lig3P97386 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.23□□□□□ -0.13
Lig3P97386 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lig3P97386 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lig3P97386 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lig3P97386 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Lig3P97386 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.23□□□□□ -0.13
Lig3P97386 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Gm13385-201ENSMUST00000121089 220 ntBASIC14.23□□□□□ -0.13
Lig3P97386 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.23□□□□□ -0.13
Lig3P97386 Gm38341-201ENSMUST00000195357 515 ntBASIC14.23□□□□□ -0.13
Lig3P97386 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.23□□□□□ -0.13
Lig3P97386 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.23□□□□□ -0.13
Lig3P97386 Gm8598-201ENSMUST00000221184 836 ntBASIC14.23□□□□□ -0.13
Lig3P97386 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.23□□□□□ -0.13
Lig3P97386 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lig3P97386 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.23□□□□□ -0.13
Lig3P97386 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lig3P97386 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.22□□□□□ -0.13
Lig3P97386 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Lig3P97386 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lig3P97386 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Lig3P97386 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Lig3P97386 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.22□□□□□ -0.13
Lig3P97386 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.22□□□□□ -0.13
Lig3P97386 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.22□□□□□ -0.13
Lig3P97386 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.22□□□□□ -0.13
Lig3P97386 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.22□□□□□ -0.13
Lig3P97386 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.22□□□□□ -0.13
Lig3P97386 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.22□□□□□ -0.13
Lig3P97386 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Lig3P97386 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lig3P97386 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lig3P97386 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lig3P97386 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.21□□□□□ -0.13
Lig3P97386 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms