Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.95□□□□□ -0.34
Nckap1P28660 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.95□□□□□ -0.34
Nckap1P28660 Gm7046-201ENSMUST00000221351 977 ntBASIC12.95□□□□□ -0.34
Nckap1P28660 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.95□□□□□ -0.34
Nckap1P28660 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.95□□□□□ -0.34
Nckap1P28660 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nckap1P28660 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Nckap1P28660 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nckap1P28660 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nckap1P28660 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.94□□□□□ -0.34
Nckap1P28660 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nckap1P28660 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm8227-201ENSMUST00000223306 571 ntBASIC12.94□□□□□ -0.34
Nckap1P28660 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nckap1P28660 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nckap1P28660 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nckap1P28660 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.94□□□□□ -0.34
Nckap1P28660 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nckap1P28660 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nckap1P28660 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.93□□□□□ -0.34
Nckap1P28660 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nckap1P28660 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nckap1P28660 Gm12502-201ENSMUST00000120197 444 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nckap1P28660 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nckap1P28660 Gm38158-201ENSMUST00000194617 339 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nckap1P28660 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.93□□□□□ -0.34
Nckap1P28660 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Nckap1P28660 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nckap1P28660 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nckap1P28660 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms