Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FAM86C2P-203ENST00000528684 1004 ntBASIC16.16■□□□□ 0.18
GPC4O75487 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.16■□□□□ 0.18
GPC4O75487 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 AC005829.1-201ENST00000570002 483 ntBASIC16.16■□□□□ 0.18
GPC4O75487 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.16■□□□□ 0.18
GPC4O75487 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
GPC4O75487 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
GPC4O75487 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GPC4O75487 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
GPC4O75487 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 ELL2P1-201ENST00000413990 1906 ntBASIC16.15■□□□□ 0.18
GPC4O75487 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.15■□□□□ 0.18
GPC4O75487 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 TFAMP1-201ENST00000412727 736 ntBASIC16.15■□□□□ 0.18
GPC4O75487 UPF3AP3-201ENST00000420996 769 ntBASIC16.15■□□□□ 0.18
GPC4O75487 GPX1P2-201ENST00000429271 606 ntBASIC16.15■□□□□ 0.18
GPC4O75487 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 AC112482.1-201ENST00000492080 688 ntBASIC16.15■□□□□ 0.18
GPC4O75487 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 AL135744.1-201ENST00000565098 629 ntBASIC16.15■□□□□ 0.18
GPC4O75487 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.15■□□□□ 0.18
GPC4O75487 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.15■□□□□ 0.18
GPC4O75487 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GPC4O75487 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.15■□□□□ 0.18
GPC4O75487 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.14■□□□□ 0.18
GPC4O75487 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 AC005622.1-201ENST00000636801 1703 ntBASIC16.14■□□□□ 0.17
GPC4O75487 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 AC073439.1-201ENST00000624121 1774 ntBASIC16.14■□□□□ 0.17
GPC4O75487 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.14■□□□□ 0.17
GPC4O75487 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 AC093724.1-201ENST00000448659 1027 ntBASIC16.14■□□□□ 0.17
GPC4O75487 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.14■□□□□ 0.17
GPC4O75487 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms