Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AP003028.1-201ENST00000577699 1033 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 EIF4A3P1-201ENST00000578499 647 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SMUG1P1-201ENST00000590640 811 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC103881.1-201ENST00000603476 538 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 U47924.2-201ENST00000607421 1097 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC005332.6-201ENST00000613178 446 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC117500.5-201ENST00000623233 527 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AP003122.6-201ENST00000623831 495 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC136469.2-201ENST00000623944 1028 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC092611.3-201ENST00000624858 718 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AL589826.2-201ENST00000635423 993 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 AC007225.1-201ENST00000566331 1836 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 NEK2P2-201ENST00000438441 1338 ntBASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
KRTAP3-3Q9BYR6 LIPT1-202ENST00000393473 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC022107.1-201ENST00000624833 3094 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 NDUFB3-201ENST00000237889 755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 OR5P1P-201ENST00000299512 925 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 MTIF3-201ENST00000381116 1104 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-354P-201ENST00000383862 107 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-468P-201ENST00000384003 109 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-610P-201ENST00000384264 107 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-574P-201ENST00000384265 107 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-196P-201ENST00000384315 107 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RNU6-1160P-201ENST00000384546 104 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 SNORA79B-201ENST00000410557 148 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC098592.2-201ENST00000413158 265 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 GUSBP5-201ENST00000418136 578 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RPS7P12-201ENST00000422385 582 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TNPO1P1-201ENST00000423641 1138 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 DPY19L1P2-201ENST00000426647 915 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC093422.3-201ENST00000428506 305 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 BX119904.1-201ENST00000432026 348 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 NPM1P18-201ENST00000434232 732 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RPS7P2-201ENST00000435134 607 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 EEF1A1P39-201ENST00000440791 250 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AL672167.3-201ENST00000465951 960 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 NDUFB4P12-201ENST00000513465 390 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 DERA-209ENST00000532964 854 ntTSL 5 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 NANOGNBP2-201ENST00000544753 553 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC104117.5-201ENST00000606195 547 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC080112.3-201ENST00000612552 880 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC025287.2-201ENST00000621911 668 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 AC020907.5-201ENST00000624372 1936 ntBASIC10.24□□□□□ -0.77
KRTAP3-3Q9BYR6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms