Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx54Q8K4L0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm9358-201ENSMUST00000183067 927 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm19187-201ENSMUST00000206781 892 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx54Q8K4L0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Gm8018-201ENSMUST00000173536 789 ntBASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Gm45550-201ENSMUST00000209380 946 ntBASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Gm9873-201ENSMUST00000063891 1097 ntBASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Gm10076-201ENSMUST00000073238 384 ntBASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx54Q8K4L0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.89■□□□□ 0.3
Ddx54Q8K4L0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx54Q8K4L0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx54Q8K4L0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.3
Ddx54Q8K4L0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Gm37905-201ENSMUST00000195310 341 ntBASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Gm19166-201ENSMUST00000196041 1063 ntBASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.89■□□□□ 0.29
Ddx54Q8K4L0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms