Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a6Q8C6K9 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Rprl1-202ENSMUST00000198476 238 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Gm22058-201ENSMUST00000083393 310 ntBASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col6a6Q8C6K9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm9540-201ENSMUST00000188230 478 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm44405-201ENSMUST00000198952 126 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm45118-201ENSMUST00000208928 825 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col6a6Q8C6K9 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Col6a6Q8C6K9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col6a6Q8C6K9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms