Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp44Q8C2S0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Gm14660-201ENSMUST00000119809 575 ntBASIC15.22■□□□□ 0.03
Usp44Q8C2S0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Gm40466-201ENSMUST00000212174 422 ntBASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.22■□□□□ 0.03
Usp44Q8C2S0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp44Q8C2S0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gm13226-201ENSMUST00000117838 404 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gm12384-201ENSMUST00000119228 919 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp44Q8C2S0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp44Q8C2S0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.21■□□□□ 0.02
Usp44Q8C2S0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp44Q8C2S0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp44Q8C2S0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Usp44Q8C2S0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gm14921-201ENSMUST00000118643 908 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gm27731-201ENSMUST00000185192 107 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gm8099-201ENSMUST00000200510 742 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp44Q8C2S0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usp44Q8C2S0 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms