Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm6983-201ENSMUST00000214912 628 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm17330-201ENSMUST00000221047 165 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpsf4Q8BQZ5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm6244-201ENSMUST00000178732 841 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpsf4Q8BQZ5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm27892-201ENSMUST00000185017 106 ntBASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm38223-201ENSMUST00000194484 695 ntBASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm18187-201ENSMUST00000196476 984 ntBASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4Q8BQZ5 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms