Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Btrc-209ENSMUST00000224478 2194 ntBASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav3-3Q5R1C3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav3-3Q5R1C3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Tcf21-202ENSMUST00000218002 1788 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms