Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdh4P39038 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Gm37497-201ENSMUST00000195830 798 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Gm19931-201ENSMUST00000198920 368 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh4P39038 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh4P39038 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.49□□□□□ -0.41
Cdh4P39038 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdh4P39038 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdh4P39038 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdh4P39038 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh4P39038 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdh4P39038 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Gm13369-201ENSMUST00000119442 987 ntBASIC12.48□□□□□ -0.41
Cdh4P39038 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.48□□□□□ -0.41
Cdh4P39038 Gm29127-201ENSMUST00000188304 517 ntBASIC12.48□□□□□ -0.41
Cdh4P39038 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdh4P39038 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh4P39038 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.48□□□□□ -0.41
Cdh4P39038 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cdh4P39038 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cdh4P39038 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh4P39038 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Cdh4P39038 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh4P39038 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh4P39038 Gm14127-201ENSMUST00000117906 678 ntBASIC12.47□□□□□ -0.41
Cdh4P39038 Gm11978-201ENSMUST00000122315 466 ntBASIC12.47□□□□□ -0.41
Cdh4P39038 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh4P39038 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdh4P39038 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.47□□□□□ -0.41
Cdh4P39038 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdh4P39038 Gm6458-201ENSMUST00000211573 635 ntBASIC12.47□□□□□ -0.41
Cdh4P39038 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.47□□□□□ -0.41
Cdh4P39038 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms