Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
P01878 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
P01878 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
P01878 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
P01878 Gm7857-201ENSMUST00000117957 358 ntBASIC13.32□□□□□ -0.28
P01878 Gm13813-201ENSMUST00000120998 787 ntBASIC13.32□□□□□ -0.28
P01878 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.32□□□□□ -0.28
P01878 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.32□□□□□ -0.28
P01878 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
P01878 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.32□□□□□ -0.28
P01878 Gm3786-201ENSMUST00000202659 378 ntBASIC13.32□□□□□ -0.28
P01878 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.32□□□□□ -0.28
P01878 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.32□□□□□ -0.28
P01878 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01878 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01878 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P01878 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.31□□□□□ -0.28
P01878 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.31□□□□□ -0.28
P01878 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01878 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
P01878 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.31□□□□□ -0.28
P01878 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gm14832-201ENSMUST00000121289 322 ntBASIC13.31□□□□□ -0.28
P01878 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.31□□□□□ -0.28
P01878 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01878 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.31□□□□□ -0.28
P01878 Gm45224-201ENSMUST00000208203 414 ntBASIC13.31□□□□□ -0.28
P01878 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.31□□□□□ -0.28
P01878 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.31□□□□□ -0.28
P01878 Gm39404-201ENSMUST00000216350 313 ntBASIC13.31□□□□□ -0.28
P01878 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P01878 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01878 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
P01878 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P01878 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.3□□□□□ -0.28
P01878 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01878 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P01878 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms