Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh1F7BJK1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gm29608-201ENSMUST00000190444 463 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gm43094-201ENSMUST00000196549 921 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh1F7BJK1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm26464-201ENSMUST00000157094 305 ntBASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh1F7BJK1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms