Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav5-4A0A075B652 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav5-4A0A075B652 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Gm20949-201ENSMUST00000206478 952 ntBASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Syt7-205ENSMUST00000224135 1557 ntBASIC10.93□□□□□ -0.66
Trav5-4A0A075B652 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms