Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm14660-201ENSMUST00000119809 575 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm22331-201ENSMUST00000158066 136 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clcf1Q9QZM3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Clcf1Q9QZM3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gm27731-201ENSMUST00000185192 107 ntBASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.84□□□□□ -0.51
Clcf1Q9QZM3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms