Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx28Q9CWT6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm15487-201ENSMUST00000122373 465 ntBASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm21854-201ENSMUST00000179901 471 ntBASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm27838-201ENSMUST00000184829 128 ntBASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm27772-201ENSMUST00000184900 187 ntBASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.25□□□□□ -0.45
Ddx28Q9CWT6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Gm9522-201ENSMUST00000182394 926 ntBASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ddx28Q9CWT6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ddx28Q9CWT6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms