Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SprnQ8BWU1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm12585-201ENSMUST00000117307 290 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.53□□□□□ -0.56
SprnQ8BWU1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.53□□□□□ -0.56
SprnQ8BWU1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
SprnQ8BWU1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm7488-201ENSMUST00000117148 684 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm15321-201ENSMUST00000121290 288 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm27772-201ENSMUST00000184900 187 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm29667-201ENSMUST00000190817 490 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm43703-201ENSMUST00000200523 763 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm6218-201ENSMUST00000219812 628 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.52□□□□□ -0.57
SprnQ8BWU1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.52□□□□□ -0.57
SprnQ8BWU1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SprnQ8BWU1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SprnQ8BWU1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SprnQ8BWU1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.51□□□□□ -0.57
SprnQ8BWU1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms