Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tpm2P58774 Gm6415-201ENSMUST00000118488 348 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm15393-201ENSMUST00000120499 219 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm14822-201ENSMUST00000122247 291 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm11594-201ENSMUST00000122313 162 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.01□□□□□ -0.01
Tpm2P58774 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.01□□□□□ -0.01
Tpm2P58774 Gm5425-201ENSMUST00000214125 459 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm5779-201ENSMUST00000218467 910 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.01□□□□□ -0.01
Tpm2P58774 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm2P58774 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15□□□□□ -0.01
Tpm2P58774 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15□□□□□ -0.01
Tpm2P58774 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Gm11557-201ENSMUST00000120200 1008 ntBASIC15□□□□□ -0.01
Tpm2P58774 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15□□□□□ -0.01
Tpm2P58774 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15□□□□□ -0.01
Tpm2P58774 Gm8927-201ENSMUST00000181978 981 ntBASIC15□□□□□ -0.01
Tpm2P58774 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Gm3222-201ENSMUST00000071282 990 ntBASIC15□□□□□ -0.01
Tpm2P58774 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tpm2P58774 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Gm40377-201ENSMUST00000204604 2015 ntBASIC15□□□□□ -0.01
Tpm2P58774 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tpm2P58774 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tpm2P58774 Daam2-202ENSMUST00000224595 1926 ntBASIC15□□□□□ -0.01
Tpm2P58774 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm2P58774 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Tpm2P58774 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 Gm2756-201ENSMUST00000195851 400 ntBASIC14.99□□□□□ -0.01
Tpm2P58774 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.99□□□□□ -0.01
Tpm2P58774 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Tpm2P58774 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Tpm2P58774 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm2P58774 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.98□□□□□ -0.01
Tpm2P58774 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.98□□□□□ -0.01
Tpm2P58774 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.98□□□□□ -0.01
Tpm2P58774 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tpm2P58774 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.98□□□□□ -0.01
Tpm2P58774 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.98□□□□□ -0.01
Tpm2P58774 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.98□□□□□ -0.01
Tpm2P58774 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms