Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 KRT8P37-201ENST00000451609 1420 ntBASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TBC1D3FA6NER0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 OR8S1-201ENST00000310194 1080 ntBASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 MEIS3P1-201ENST00000495167 958 ntBASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 AC123567.1-201ENST00000548294 1261 ntBASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 WASH4P-201ENST00000564273 1246 ntBASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 ME2P1-201ENST00000426028 1970 ntBASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TBC1D3FA6NER0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 GIMAP3P-201ENST00000495150 836 ntBASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AC092337.1-201ENST00000568699 1129 ntBASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TBC1D3FA6NER0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms