Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Chd6A3KFM7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm17877-201ENSMUST00000192578 814 ntBASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm2875-201ENSMUST00000211333 360 ntBASIC10.45□□□□□ -0.74
Chd6A3KFM7 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm26957-201ENSMUST00000182645 977 ntBASIC10.45□□□□□ -0.74
Chd6A3KFM7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm38092-201ENSMUST00000195600 653 ntBASIC10.45□□□□□ -0.74
Chd6A3KFM7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Gm6304-201ENSMUST00000096579 447 ntBASIC10.45□□□□□ -0.74
Chd6A3KFM7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Chd6A3KFM7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm27910-201ENSMUST00000185004 107 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm5100-201ENSMUST00000195631 589 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm15744-201ENSMUST00000161734 213 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Gm42433-201ENSMUST00000196806 940 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Chd6A3KFM7 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.44□□□□□ -0.74
Chd6A3KFM7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Chd6A3KFM7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms