Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Gm4995-201ENSMUST00000117247 432 ntBASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk1bQ9Z2C6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Gm43703-201ENSMUST00000200523 763 ntBASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk1bQ9Z2C6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gm38144-201ENSMUST00000192790 465 ntBASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gm5161-201ENSMUST00000075243 853 ntBASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk1bQ9Z2C6 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.09□□□□□ -0.47
Upk1bQ9Z2C6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk1bQ9Z2C6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk1bQ9Z2C6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms